Bioconductor Test fisher exact

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R test fisher exact workspace

updated 6.3 years ago by Aaron Lun ★ 28k • written 6.3 years ago by Sara ▴ 20

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1.5k

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edgeR deanalysis test fisher exact

updated 7.0 years ago by Aaron Lun ★ 28k • written 7.0 years ago by thkapell ▴ 10

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1.4k

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test fisher exact EmpiricalBrownsMethod affy

updated 8.9 years ago by Gordon Smyth 52k • written 8.9 years ago by tofukaj • 0

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2.6k

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test fisher exact r findoverlapsofpeaks

updated 22 months ago by cherokee1456 • 0 • written 9.1 years ago by Jurat Shahidin ▴ 80

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1.9k

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test fisher exact

10.4 years ago sleidymagaly • 0

5 results • Page 1 of 1

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Answer: Use of limma R package with targeted proteomics for DE analysis by Gordon Smyth 52k

It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…

Comment: WGCNA by pammelala304 • 0

Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.

Comment: Does anyone have the command to download all of the core_nt using blast_db_get() by Matthew Thornton ▴ 380

Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…

Comment: normalizatino of dna methylation EPIC data by user_bioinfo • 0

yes actually that's why I did, and its all good! thank you for your response

Comment: batch effect removal for agilent microarray data by gaye.yilmaz • 0

Hello again, Can using inSilicoMerging handle this situation?

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Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: normalizatino of dna methylation EPIC data

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

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